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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890923.1_cds_XP_016445623.1_40567
CDS Infomation

[gene=LOC107770804] [db_xref=GeneID:107770804] [protein=regulatory-associated protein of TOR 1-like] [protein_id=XP_016445623.1] [location=join(936..1031,2125..2227,3814..3896,4016..4174,4252..4368,4493..4653,5295..5449,5540..5684,5765..5843,5938..6039,7114..7197,7308..7418,13842..14195,14283..14472,15093..15689,15839..16171,16287..16410,17225..17349,17458..17603,19006..19131)] [gbkey=CDS]
Sequence

ATGGGATCTCCTTGTCTTAAGCCTTTGTGTGATGCAAAGAAATCTTTTGGGAGATTCATT
TATGATAATGGGCAACTTTACAGTGGAGATGCAAAAATGAAGACGGGATGTGTTGCCCTT
GTGTTGTGTTTGAACATCAGCGTTGATCCACCTGATGTAATAAAGATATCTCCTTGTGCT
CGAATGCAGTGTTGGATTGATCCATTTTCTGTGGCACCTCAAAAGGCCCTTGAAACAATT
GGGAGAACATTGAATGAACAATATGAGAGGTGGCAACCTAGGGCACGCTACAAGATCTCC
TTGGATCCTACTGTTGATGAAGTTAAGAAACTTTGCACAACATGTAGGAAGTATGCCAAG
TCAGAACGAGTTCTGTTCCATTATAATGGACATGGTGTGCCAAAACCAACATCCAATGGT
GAAATTTGGCTATTTAATAAGAGTTATACGCAGTATATCCCATTGCCGATTACTGACCTG
GACTCTTGGTTGAAGACACCATCGATCTATGTCTTTGACTGCTCAGCTGCTGGGATGATT
GTTAATACCTTTATAGAGCTCCAAGACTTGACTGTCTCTGATTCCTCTGGCCCTTCTACG
AGAGATTGTATTCTGCTTGCTGCTTGTGAAGCACATGAGACACTTCCTCAAAGTGCTGAA
TTTCCTGCTGATGTTTTCACTTCCTGCCTCACAACTCCAATCAAAATGGCATTGAGATGG
TTTTGCACACGGTCATTGATTCGTGAGTCACTTGATTATGGTCTAATAGATCGAATTCCT
GGACGCCAAACTGATCGAAAGACACCTCTTGGTGAATTGAATTGGATTCTCACTGCAGTA
ACCGACACAATTGCCTGGAATGTTCTACCACGAGATCTATTTCAAAAATTGTTCAGGCAA
GACCTATTAGTTGCTAGTTTATTCAGAAATTTTTTACTTGCTGAAAGAATCGTGCGTTCT
GCAAATTGTTCACCAATTTCATACCCAATGCTACCACCTACTCATCAGCACCACATGTGG
GATGCTTGGGACATGGCAACAGAAATCTGCCTTTTGCAGCTTCCTACTTTGATTGATGAT
CCGAATGTGGAATTTCAGCCTAGCCCATTCTTCACGGAACAGTTGACAGCTTTTGAGGTT
TGGCTTGACAATGGATCAGAGAATAAAAATCCACCAGAGCAGTTGCCCATTGTTCTACAG
GTGTTACATACTCAATGCCACCGGTTCCGTGCACTGGTTCTTCTTGAGAGATTTCTCAAT
ATGGGACTTTGGGCTGTAGATCTGGTCTTGTCTGTTGGAATATTTCCTTACGTTCTAAAG
CTTTTGCAAACCACGGCTCCGGAGCTTAGGCAAATTCTTGTCTTCATTTGGACGAAGATC
CTTGCCGTTGATAAGTCTTGCCAGGTTGACCTTGTTAAAGATGGTGGACATGTGTATTTC
ATTAGATTTCTCGACAGTGTTGACGCTTATCCAGAACAAAGGGCAATGGCTGCATTTGTC
TTGGCAGTCATTATTGATGGTTACAGACAGGGTCAGGAGGCCTGTATTGAAGCAGGGCTT
ATTAATGTCTGCCTGAAGCATCTTCAGGGATCAATTCCTAATGATGCACAAACTGAACCA
CTGTTTCTTCAATGGCTGTGCCTCTGTCTGGGAAAGCTCTGGGAGGATTTCACCGAGGCA
CAAGTGCTAGGTTTGCAGGCAGATGCACCAGCAATATTTGTGCCTCTACTTTCTCAATCC
CAGCCTGAGGTACGAGCTGCATCTGTTTTTGCACTAGGTACTTTACTTGATGTTGGATTT
GATACATCTTGGGACGACATTATAGAGGATGAACACTGCAATTATGAGGAGAAAGCTAGG
GCAGAAGTCGTCATAATTAGGAGTCTTCTAAGTGTTGTTTCTGATGGAAGCCCTTTTGTA
CGAGCGGAGGTTGCTGTTGTTTTGGCACGTTTTGCCTTTGGACATAACAAGCACCTGAAG
TCGGTTGCAGCTGCATATTTGAAGTCGCAGTCTAATTCCATGATCACTTCCTTGCCTTCT
TTTGTGTTCAAGAGTTCAGGTAGTGGCTATACATCCCCAACTCATTATGTTCCACATGGA
AATGTAGTTCCATCTCCTATTGCTCCTTTATTGAGAGTGGGAGGAGACAGTCAGTCTATA
TCTCGTGATGGGAGAGTCTCAACTAGCAGCCCTGTTGCAACACCTGGCTTCATGCATGGA
TCTCCTTTGTCCGATGATTCTTCTCAACATTTTGACTCTGAAAGATTGAGTGGTGCTGTT
AGCAATGGTGTTGTTAATCATAGAAGACCCAGGCCACTAGACAATTCACTCTATTCTCAG
TGTGTGCTGGCCATGTGTGCCTTAGCAAAGGATCCATCACCTCGTGTTGCAGGTCTTGGC
CGGAAAGTGCTTTCGATTATTGGGATTGACCAAGTTCTTGCCAAGTCTGTCAAGTCAACT
GTTGAATCCACAACAGCTTCTGGCTGTAATTTTGCTGGATTGAATCGATCGTCTTCTTGG
TTTGACATGAGTGGAGGTGGACATTTACCTCTGACTTTTAGGACTCCTCCTGTTAGTCCC
CCTTGGTCCAGTTACTTAACAGGAATGCGAAGAGTTTATTCTTTAGACTTCAGGCCTCAC
CTAATGAACTCTCCAGACTCAGGATTAGCTGATCCGCTCTTGGGTTCTGGTGGATCTTCT
GGAGCTTCAGAACGCAGTTTTCTTCCACAGTCAACCATCTATAATTGGAGTTGTGGCCAC
TTCTCGAAGCCACTTCTTACTGCAGCTGATGATAGTGAAGAGATCATTGCTAAGAGAGAA
GTGAAGGAAAAGTTAGCTCTTGACCTCATTGCAAAATGCCAGCACTGTTCGGTGAGCAGA
CTGCATAATCAAATTGCCAGTTGGGATACAAAGTTTGAGAGTGGTACGAAAACTGCTTTG
CTGCAGCCCTTCTCATCAATTGTGGTTGCTTCAGATGAGCGTGAATTGATCAGGGTGTGG
AATTACAAGGAGGCTACCCTTCTTAACAGCTTCGACAACCATGGTTACCCTGATAAAGGA
ATTTCAAAGCTCTACCTCGTGAATGAGCTTGATGAGAGCTTGCTCCTTGTTGCTTCAGGT
GATGGCAACATACGGATTTGGAAAGACTATACTGAAAGAGGTCAACAGAAACTAGTTTCT
GCATTCTCTGCAATTCAAGGTGACAGACCTGTTGCGCGCAGTGTGAATGCTGTTGTGGAT
TGGCAGCAGCAGTCTGGATACCTGCTTGCATCTGGTGAGATTTCTTCTATCATGGCTTGG
GATCTTGACAAAGAGCAGCTTGTAAATACTGCTCCAACATCCTCGGATTACAGCATCTCA
GCATTGGTTAGTTTTTTCACATTGCTCTGA

Peptide Sequence

PEP ID

XP_016445623.1
PEP Infomation

PREDICTED: regulatory-associated protein of TOR 1-like [Nicotiana tabacum]
Sequence

MGSPCLKPLCDAKKSFGRFIYDNGQLYSGDAKMKTGCVALVLCLNISVDPPDVIKISPCA
RMQCWIDPFSVAPQKALETIGRTLNEQYERWQPRARYKISLDPTVDEVKKLCTTCRKYAK
SERVLFHYNGHGVPKPTSNGEIWLFNKSYTQYIPLPITDLDSWLKTPSIYVFDCSAAGMI
VNTFIELQDLTVSDSSGPSTRDCILLAACEAHETLPQSAEFPADVFTSCLTTPIKMALRW
FCTRSLIRESLDYGLIDRIPGRQTDRKTPLGELNWILTAVTDTIAWNVLPRDLFQKLFRQ
DLLVASLFRNFLLAERIVRSANCSPISYPMLPPTHQHHMWDAWDMATEICLLQLPTLIDD
PNVEFQPSPFFTEQLTAFEVWLDNGSENKNPPEQLPIVLQVLHTQCHRFRALVLLERFLN
MGLWAVDLVLSVGIFPYVLKLLQTTAPELRQILVFIWTKILAVDKSCQVDLVKDGGHVYF
IRFLDSVDAYPEQRAMAAFVLAVIIDGYRQGQEACIEAGLINVCLKHLQGSIPNDAQTEP
LFLQWLCLCLGKLWEDFTEAQVLGLQADAPAIFVPLLSQSQPEVRAASVFALGTLLDVGF
DTSWDDIIEDEHCNYEEKARAEVVIIRSLLSVVSDGSPFVRAEVAVVLARFAFGHNKHLK
SVAAAYLKSQSNSMITSLPSFVFKSSGSGYTSPTHYVPHGNVVPSPIAPLLRVGGDSQSI
SRDGRVSTSSPVATPGFMHGSPLSDDSSQHFDSERLSGAVSNGVVNHRRPRPLDNSLYSQ
CVLAMCALAKDPSPRVAGLGRKVLSIIGIDQVLAKSVKSTVESTTASGCNFAGLNRSSSW
FDMSGGGHLPLTFRTPPVSPPWSSYLTGMRRVYSLDFRPHLMNSPDSGLADPLLGSGGSS
GASERSFLPQSTIYNWSCGHFSKPLLTAADDSEEIIAKREVKEKLALDLIAKCQHCSVSR
LHNQIASWDTKFESGTKTALLQPFSSIVVASDERELIRVWNYKEATLLNSFDNHGYPDKG
ISKLYLVNELDESLLLVASGDGNIRIWKDYTERGQQKLVSAFSAIQGDRPVARSVNAVVD
WQQQSGYLLASGEISSIMAWDLDKEQLVNTAPTSSDYSISALVSFFTLL

Transcript Sequence

Gene sequence data has not been registered.